{ "_id": "6a1ee6b1b401979e734115bc", "Package": "glyfun", "Title": "Glycan-Centric Functional Enrichment Analysis", "Version": "0.1.0", "Authors@R": "person(\"Bin\", \"Fu\", , \"23110220018@m.fudan.edu.cn\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-8567-2997\"))", "Description": "Provides functional enrichment analysis for\nglycoproteomics data, including both protein-centric and\nglycan-centric approaches. The 'enrich_xxx()' functions answer\n\"Which functions are enriched for proteins with dysregulated\nglycosylation?\" (traditional protein-level enrichment), while\n'enrich_gc_xxx()' functions answer \"Which functions are\nenriched for dysregulated glycan traits?\" (glycan-centric,\nlinking glycan traits like core-fucosylation with functional\nannotations). Supports both Over Representation Analysis (ORA)\nand Gene Set Enrichment Analysis (GSEA) with common databases\nincluding GO, KEGG, Reactome, WikiPathways, DO (Disease\nOntology), and NCG (Network of Cancer Genes). Integrates\nseamlessly with 'glydet' (for site-specific derived traits) and\n'glystats' (for differential expression analysis).", "License": "MIT + file LICENSE", "Config/testthat/edition": "3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "URL": "https://glycoverse.github.io/glyfun/", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libglpk-dev make libicu-dev libpng-dev\nlibuv1-dev libxml2-dev libssl-dev zlib1g-dev", "Repository": "https://glycoverse.r-universe.dev", "Date/Publication": "2026-04-25 05:50:12 UTC", "RemoteUrl": "https://github.com/glycoverse/glyfun", "RemoteRef": "v0.1.0", "RemoteSha": "307b4163e143da99f14d5bd025d305d007a03f58", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-20 03:29:13 UTC", "User": "root" }, "Author": "Bin Fu [aut, cre] (ORCID: )", "Maintainer": "Bin Fu <23110220018@m.fudan.edu.cn>", "MD5sum": "76fe542d58714666dfb3bac3bb5fb63f", "_user": 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