Package: glyanno
Title: Hierarchical Glycan Annotation
Version: 0.5.0
Authors@R: 
    person("Bin", "Fu", , "23110220018@m.fudan.edu.cn", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-8567-2997"))
Description: Hierarchical annotation of glycans based on molecule mass,
        composition, and structure. Starting from a molecule mass,
        glyanno calculates possible glycan compositions. Given a glycan
        composition, glyanno further deduces possible glycan
        structures. For glycan structures with generic monosaccharides
        (e.g., "Hex", "HexNAc"), glyanno refines them into specific
        types (e.g., "Glc", "Gal"). For structures lacking linkage
        information (e.g., "Gal(??-?)GalNAc(??-"), glyanno infers the
        most likely linkages (e.g., "Gal(b1-3)GalNAc(a1-").
License: MIT + file LICENSE
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
URL: https://glycoverse.github.io/glyanno/
Imports: checkmate, cli, dplyr, glue, glyparse (>= 0.5.3), glyrepr (>=
        0.11.0), glymotif, glydb (>= 0.4.0), igraph, purrr, rlang,
        stringr, tidyselect, tidyr, tibble, httr2
VignetteBuilder: knitr
Depends: R (>= 4.1)
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev
        libxml2-dev libssl-dev
Repository: https://glycoverse.r-universe.dev
Date/Publication: 2026-04-30 10:20:45 UTC
RemoteUrl: https://github.com/glycoverse/glyanno
RemoteRef: v0.5.0
RemoteSha: b5308bd8b63947953001c131188af172103b4fcc
NeedsCompilation: no
Packaged: 2026-06-24 05:28:34 UTC; root
Author: Bin Fu [aut, cre] (ORCID: <https://orcid.org/0000-0001-8567-2997>)
Maintainer: Bin Fu <23110220018@m.fudan.edu.cn>