NEWS
glycoverse 0.3.1
glyfun is now managed as a non-core glycoverse package.
glycoverse 0.3.0
New features
glycoverse_update() gains a dev_to_latest parameter to control whether development versions should be updated to their latest versions (#2).
glycoverse 0.2.5
New features
- Migrate from GitHub releases to r-universe for package installation.
glycoverse_update() now uses pak::repo_add() and pak::pkg_install() for automatic updates.
Minor improvements and bug fixes
- Remove the
Remotes field from DESCRIPTION as dependencies are now installed from r-universe.
- Update installation guide in README.
glycoverse 0.2.4
Minor improvements and bug fixes
- Fix a bug in
glycoverse_update() that non-core packages were ignored.
glycoverse 0.2.3
- Fig a bug in
glycoverse_deps().
glycoverse 0.2.2
Minor improvements and bug fixes
- Use the release version of glydraw.
glycoverse 0.2.1
- Remove glysmith from core dependency.
glycoverse 0.2.0
New features
glycoverse_sitrep() only checks glycoverse packages now, including a few new packages, i.e., glydraw, glydb, glyanno, glysmith.- Remove
glyenzy from glycoverse core packages.
glycoverse_update() now updates glycoverse packages using pak, instead of just printing the commands.
Minor improvements and bug fixes
- Fix the bug that
glycoverse_deps() raised an error when recursive was TRUE.
- Fix the bug that upstream version numbers of Bioconductor dependencies could not be fetched.
- Update all dependencies to their latest versions.
- Add more packages to the end of the case study vignettes.
glycoverse 0.1.3
- Use the CRAN version of glyparse.
glycoverse 0.1.2
- Use the CRAN version of glyrepr.
glycoverse 0.1.1
- Fix a bug in
glycoverse_update() where the upstream packages were not set correctly (CRAN, instead of GitHub).
glycoverse 0.1.0