Package: glyenzy
Title: Deconstruction Glycosylation Biosynthesis
Version: 0.6.1
Authors@R: 
    person("Bin", "Fu", , "23110220018@m.fudan.edu.cn", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-8567-2997"))
Description: Simulates the biosynthetic process of glycosylation in
        silico, enabling computational analysis of glycan biosynthesis
        pathways. Key features include: identifying specific
        glycosyltransferases responsible for each glycosidic bond at
        the bond level; reconstructing complete biosynthetic pathways
        for given glycans; exploring possible transformations between
        two glycan structures via glycosyltransferases and
        glycosidases; and predicting glycans that can be synthesized
        from substrate structures and enzyme sets. The package supports
        multiple glycan types including N-glycans, O-GalNAc, O-Man,
        O-GlcNAc, O-Fuc, and O-Glc. As a downstream component of the
        glycoverse ecosystem, it integrates seamlessly with 'glyrepr',
        'glyparse', and 'glymotif' to provide practical, analysis-ready
        insights into glycan biosynthesis for omics researchers.
License: MIT + file LICENSE
Suggests: ggplot2, knitr, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
URL: https://glycoverse.github.io/glyenzy/
Imports: checkmate, cli, glydraw (>= 0.4.0), glymotif (>= 0.12.1),
        glyrepr (>= 0.10.0), glyparse (>= 0.5.3), igraph, purrr,
        fastmap, dplyr, rlang, tibble, stringr, R6
Depends: R (>= 4.1)
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev
Repository: https://glycoverse.r-universe.dev
Date/Publication: 2026-06-19 04:24:36 UTC
RemoteUrl: https://github.com/glycoverse/glyenzy
RemoteRef: v0.6.1
RemoteSha: 65ceddfef7491b472d4650db97308a302e5e3e07
NeedsCompilation: no
Packaged: 2026-07-02 05:19:22 UTC; root
Author: Bin Fu [aut, cre] (ORCID: <https://orcid.org/0000-0001-8567-2997>)
Maintainer: Bin Fu <23110220018@m.fudan.edu.cn>