Package: glydb 0.7.2


Bin Fu
glydb: Glycan Structure Database
Provides a comprehensive database of glycan structures from GlyTouCan, including fully determined glycan structures with complete linkage, substituent, anomer, and monosaccharide information. This database serves as a foundational resource for the glycoverse ecosystem, enabling glycan structure analysis, comparison, and research applications.
Authors:
glydb_0.7.2.tar.gz
glydb_0.7.2.zip(r-4.7-any)glydb_0.7.2.zip(r-4.6-any)glydb_0.7.2.zip(r-4.5-any)
glydb_0.7.2.tgz(r-4.6-any)glydb_0.7.2.tgz(r-4.5-any)
glydb_0.7.2.tar.gz(r-4.7-any)glydb_0.7.2.tar.gz(r-4.6-any)
glydb_0.7.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
glydb/json (API)
| # Install 'glydb' in R: |
| install.packages('glydb', repos = c('https://glycoverse.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/glycoverse/glydb/issues
Pkgdown/docs site:https://glycoverse.github.io
- glydb_data - GlyGen Glycan Data
Last updated from:af614eaf3b (on v0.7.2). Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 273 | ||
| source / vignettes | OK | 219 | ||
| linux-release | OK | 343 | ||
| macos-release | OK | 478 | ||
| macos-oldrel | OK | 352 | ||
| windows-devel | OK | 364 | ||
| windows-release | OK | 350 | ||
| windows-oldrel | OK | 354 | ||
| wasm-release | OK | 148 |
Exports:glydb_compositionsglydb_speciesglydb_structuresglytoucan_to_strucstruc_to_glytoucan
Dependencies:backportscheckmateclicpp11dplyrgenericsglueglyreprigraphlatticelifecyclemagrittrMatrixpillarpkgconfigpurrrR6Rcpprlangrstackdequestringistringrtibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Get Compositions From Glydb Data | glydb_compositions |
| GlyGen Glycan Data | glydb_data |
| Get Supported Species From Glydb Data | glydb_species |
| Get Structures From Glydb Data | glydb_structures |
| Convert GlyTouCan Accessions to Glycan Structures | glytoucan_to_struc |
| Convert Glycan Structures to GlyTouCan Accessions | struc_to_glytoucan |
